Open Science Publications

Forum Nazionale sulla Medicina di Precisione

SPOKE 1 Publications

DOI Metabolic regulation by p53 prevents R-loop-associated genomic instability
DOI Extracellular serine empowers epidermal proliferation and psoriasis-like symptoms
DOI Transglutaminase type 2-dependent crosslinking of IRF3 in dying melanoma cells
DOI Serine and one-carbon metabolism sustain non-melanoma skin cancer progression
DOI Gene expression in organoids: an expanding horizon
DOI A Novel Prognostic Biomarker in Metastatic Prostate Cancer
DOI Apoptotic cell death in disease—Current understanding of the NCCD 2023
DOI NAADP-Evoked Ca2+ Signaling Leads to Mutant Huntingtin Aggregation and Autophagy Impairment in Murine Astrocytes
DOI The STING/TBK1/IRF3/IFN type I pathway is defective in cystic fibrosis
DOI Type 2 transglutaminase in the nucleus: the new epigenetic face of a cytoplasmic enzyme
DOI Sustainable Vegetable Oil-Based Biomaterials: Synthesis and Biomedical Applications
DOI ZFP750 affects the cutaneous barrier through regulating lipid metabolism
DOI Microbiota-gut-brain axis: relationships among the vagus nerve, gut microbiota, obesity, and diabetes
DOI To metabolomics and beyond: a technological portfolio to investigate cancer metabolism
DOI Aged mesenchymal stem cells and inflammation: from pathology to potential therapeutic strategies
DOI Hippo Pathway Activation in Aged Mesenchymal Stem Cells Contributes to the Dysregulation of Hepatic Inflammation in Aged Mice
DOI Harnessing metabolism of hepatic macrophages to aid liver regeneration
DOI The ubiquitin ligase TRIM32 promotes the autophagic response to Mycobacterium tuberculosis infection in macrophages
DOI Programmed Cell Death Pathways in Cholangiocarcinoma: Opportunities for Targeted Therapy
DOI Transglutaminase 2 and Ferroptosis: a new liaison?
DOI Study of lncRNAs expression profile in the response to biological drugs in Psoriatic Arthritis: MEG3 could be a potential genomic biomarker of therapy efficacy
DOI The obesity-autophagy-cancer axis: Mechanistic insights and therapeutic perspectives
DOI Metastatic outgrowth via the two-way interplay of autophagy and metabolism
DOI The rs11568820 Variant in the Promoter Region of Vitamin D Receptor Gene Is Associated with Clinical Remission in Rheumatoid Arthritis Patients Receiving Tumor Necrosis Factor Inhibitors
DOI Sex differences in chronic kidney disease–related complications and mortality across levels of glomerular filtration rate
DOI ER-mitochondria association negatively affects wound healing by regulating NLRP3 activation
DOI Mitophagy modulation for the treatment of cardiovascular diseases
DOI Large-scale DNA sequencing identifies rare variants associated with Systemic Lupus Erythematosus susceptibility in known risk genes
DOI The Role of TLR-2 in Lethal COVID-19 Disease Involving Medullary and Resident Lung Megakaryocyte Up-Regulation in the Microthrombosis Mechanism
DOI Monocyte bioenergetics: An immunometabolic perspective in metabolic dysfunction-associated steatohepatitis
DOI Potential Therapeutic Targets to Modulate the Endocannabinoid System in Alzheimer’s Disease
DOI Association between Controlling Nutritional Status (CONUT) Score and Body Composition, Inflammation and Frailty in Hospitalized Elderly Patients
DOI Targeting exhausted cytotoxic T cells through CTLA-4 inhibition promotes elimination of neoplastic cells in human myelofibrosis xenografts
DOI CD38 restrains the activity of extracellular cGAMP in a model of multiple myeloma
DOI Chapter Four – Settling the uncertainty about unconventional circulating tumor cells: Epithelial-to-mesenchymal transition, cell fusion and trogocytosis
DOI Decreased circulating IPA levels identify subjects with metabolic comorbidities: A multi-omics study
DOI Molecular profiling of a bladder cancer with very high tumour mutational burden
DOI The Role of Transglutaminase 2 in Cancer: An Update
DOI Characterization of a novel IDH2-R159H mutation in acute myeloid leukaemia: Effects on cell metabolism and differentiation
DOI Genomic and transcriptomic profiling of hepatocellular carcinoma reveals a rare molecular subtype
DOI Saliva-Based Biomarkers in Oral Squamous Cell Carcinoma Using OMICS Technologies: A Systematic Review

SPOKE 2 Publications

DOI Artificial intelligence-based models to assess the risk of malignancy on radiological imaging in patients with intraductal papillary mucinous neoplasm of the pancreas: scoping review
DOI Efficacy of MRI data harmonization in the age of machine learning. A multicenter study across 36 datasets
DOI A detailed mathematical model of the human atrial cardiomyocyte: integration of electrophysiology and cardiomechanics
DOI Artificial intelligence in endocrinology: a comprehensive review
DOI Caveolin-3 and Caveolin-1 Interaction Decreases Channel Dysfunction Due to Caveolin-3 Mutations
DOI Anatomical Study of the Application of a Galeo-Pericranial Flap in Oral Cavity Defects Reconstruction
DOI Dissecting human anatomy learning process through anatomical education with augmented reality: AEducAR 2.0, an updated interdisciplinary study
DOI Correlation-based network integration of lung RNA sequencing and DNA methylation data in chronic obstructive pulmonary disease
DOI Investigation of a potential upstream harmonization based on image appearance matching to improve radiomics features robustness: a phantom study

SPOKE 3 Publications

DOI Recapitulating thyroid cancer histotypes through engineering embryonic stem cells
DOI In Vitro Models of Bacterial Biofilms: Innovative Tools to Improve Understanding and Treatment of Infections
DOI Nanoparticles: Synthesis, Pegylation, Characterization and Study of Their Luminescence Properties
DOI Metadynamics simulations for the investigation of drug loading on functionalized inorganic nanoparticles
DOI Gene expression in organoids: an expanding horizon
DOI Sustainable Vegetable Oil-Based Biomaterials: Synthesis and Biomedical Applications
DOI Serine and one-carbon metabolism sustain non-melanoma skin cancer progression
DOI Ca2+ signaling and cell death
DOI 3D Cell Migration Chip (3DCM-Chip): A New Tool toward the Modeling of 3D Cellular Complex Systems
DOI Novel half Salphen cobalt(iii) complexes: synthesis, DNA binding and anticancer studies
DOI ANP32E drives vulnerability to ATR inhibitors by inducing R-loops-dependent Transcription Replication Conflicts in Triple Negative Breast Cancer
DOI Control-FREEC viewer: a tool for the visualization and exploration of copy number variation data
DOI First-hit SETBP1 mutations cause a myeloproliferative disorder with bone marrow fibrosis
DOI ER-mitochondria association negatively affects wound healing by regulating NLRP3 activation
DOI New Parametric 2D Curves for Modeling Prostate Shape in Magnetic Resonance Images
DOI 3D Cell Migration Chip (3DCM-Chip): A New Tool toward the Modeling of 3D Cellular Complex Systems
DOI ARID1A Mutations in Gastric Cancer: A Review with Focus on Clinicopathological Features, Molecular Background and Diagnostic Interpretation
DOI BRCA1 foci test as a predictive biomarker of olaparib response in ovarian cancer patient-derived xenograft models
DOI Overview of BH3 mimetics in ovarian cancer
DOI Molecular profiling of a bladder cancer with very high tumour mutational burden
DOI Genomic and transcriptomic profiling of hepatocellular carcinoma reveals a rare molecular subtype
DOI The endothelin-1-driven tumor-stroma feed-forward loops in high-grade serous ovarian cancer
DOI Fusion–fission–mitophagy cycling and metabolic reprogramming coordinate nerve growth factor (NGF)-dependent neuronal differentiation
DOI Megalencephalic leukoencephalopathy with subcortical cysts protein-1: A new calcium-sensitive protein functionally activated by endoplasmic reticulum calcium release and calmodulin binding in astrocytes
DOI Modeling of Magnetic Scaffolds as Drug Delivery Platforms for Tissue Engineering and Cancer Therapy
DOI Terahertz Imaging Unravels the Role of Nanoparticle Distribution in Magnetic Scaffolds for RF Hyperthermia
DOI Microwave Imaging for Monitoring Bone Healing Using Magnetic Scaffolds: An Initial Analysis
DOI Analytical Fitting of Dielectric Response of Basal Cell Carcinoma
DOI A Numerical Analysis of Microwave Hyperthermia of Deep-Seated Tumors Using Magneto-Dielectric Implants
DOI Human DNA topoisomerase I poisoning causes R loop–mediated genome instability attenuated by transcription factor IIS
DOI 3D Cell Migration Chip (3DCM-Chip): A New Tool toward the Modeling of 3D Cellular Complex Systems
DOI The miRNA Contribution in Adipocyte Maturation

SPOKE 4 Publications

DOI Sex hormones differentially contribute to Parkinson disease in males: A multimodal biomarker study
DOI Assessing the relationship between cardiovascular and small airway disease and acute events in COPD: The ARCADIA study protocol
DOI Value of Artificial Intelligence in Evaluating Lymph Node Metastases
DOI MiR-494 induces metabolic changes through G6pc targeting and modulates sorafenib response in hepatocellular carcinoma
DOI Personalised antiplatelet therapies for coronary artery disease: what the future holds
DOI Altered Thyroid Feedback Loop in Klinefelter Syndrome: From Infancy Through the Transition to Adulthood
DOI Prospective Validation Study of a Novel Integrated Pathway Based on Clinical Features, Magnetic Resonance Imaging Biomarkers, and MicroRNAs for Early Detection of Prostate Cancer
DOI Clinical and neurochemical correlates of the APOE genotype in early-stage Parkinson’s disease
DOI Advancing the PD-L1 CPS test in metastatic TNBC: Insights from pathologists and findings from a nationwide survey
DOI Cost analysis of archives in the pathology laboratories: from safety to management
DOI Management of Coronary Artery Disease in Older Adults: Recent Advances and Gaps in Evidence
DOI Total Bio-Based Material for Drug Delivery and Iron Chelation to Fight Cancer through Antimicrobial Activity
DOI Atrial natriuretic peptide stimulates autophagy/mitophagy and improves mitochondrial function in chronic heart failure
DOI High-risk TP53 mutations predict poor primary treatment response of patients with head and neck squamous cell carcinoma
DOI The Immune Cells in the Development of Oral Squamous Cell Carcinoma
DOI A pathogenic variant in the FLCN gene presenting with pure dementia: is autophagy at the intersection between neurodegeneration and cancer?
DOI Noncoding RNAs in Hepatocellular Carcinoma: Potential Applications in Combined Therapeutic Strategies and Promising Candidates of Treatment Response
DOI Quantitative Evaluation by Digital Pathology of Immunohistochemical Expression of CK7, CK19, and EpCAM in Advanced Stages of NASH
DOI Molecular mechanisms of naringenin modulation of mitochondrial permeability transition acting on F1FO-ATPase and counteracting saline load-induced injury in SHRSP cerebral endothelial cells
DOI Melanoma clinicopathological groups characterized and compared with dermoscopy and reflectance confocal microscopy
DOI Exploring the Link between BMI and Aggressive Histopathological Subtypes in Differentiated Thyroid Carcinoma—Insights from a Multicentre Retrospective Study
DOI UCP2, a Member of the Mitochondrial Uncoupling Proteins: An Overview from Physiological to Pathological Roles
DOI Total osteocalcin levels are independently associated with worse testicular function and a higher degree of hypothalamic–pituitary–gonadal axis activation in Klinefelter syndrome
DOI Digital pathology structure and deployment in Veneto: a proof-of-concept study
DOI High-Risk HPV CISH Detection in Cervical Biopsies with Weak and/or Focal p16 Immunohistochemical Positivity
DOI Cardiac magnetic resonance reveals biventricular impairment in Cushing’s syndrome: a multicentre case-control study

SPOKE 5 Publications

DOI Lactobacillus rhamnosus GG cell-free supernatant as a novel anti-cancer adjuvant
DOI Insights into the Structural Conformations of the Tau Protein in Different Aggregation Status
DOI L1077P CFTR pathogenic variant function rescue by Elexacaftor–Tezacaftor–Ivacaftor in cystic fibrosis patient-derived air–liquid interface (ALI) cultures and organoids: in vitro guided personalized therapy of non-F508del patients
DOI Readthrough approach by NV translational readthrough inducing drugs (TRIDs): a study of the possible off-target effects on natural termination codons (NTCs) on TP53 and housekeeping genes expression.
DOI BMP7 promotes cardiomyocyte regeneration
DOI Decline of gastric cancer mortality in common variable immunodeficiency in the years 2018-2022
DOI A novel complement-fixing IgM antibody targeting GPC1 as a useful immunotherapeutic strategy for the treatment of pancreatic ductal adenocarcinoma
DOI Trends and Applications in Computationally Driven Drug Repurposing
DOI In silico analysis and theratyping of an ultra-rare CFTR genotype (W57G/A234D) in primary human rectal and nasal epithelial cells
DOI BMP7 promotes cardiomyocyte regeneration in zebrafish and adult mice
DOI From Conventional to Sustainable Catalytic Approaches for Heterocycles Synthesis
DOI Genomic and functional analysis of the mucinolytic species Clostridium celatumClostridium tertium, and Paraclostridium bifermentans
DOI Multiplexed imaging to reveal tissue dendritic cell spatial localisation and function
DOI Oleuropein, a Component of Extra Virgin Olive Oil, Improves Liver Steatosis and Lobular Inflammation by Lipopolysaccharides–TLR4 Axis Downregulation
DOI Optimizing Transfection Efficiency in CAR-T Cell Manufacturing through Multiple Administrations of Lipid-Based Nanoparticles
DOI Oropharyngeal microbial ecosystem perturbations influence the risk for acute respiratory infections in common variable immunodeficiency
DOI Specific Inhibitors of Mitochondrial Deacylase Sirtuin 4 Endowed with Cellular Activity
DOI Structure-based mechanism of riboregulation of the metabolic enzyme SHMT1
DOI Targeted therapy for multiple myeloma: an overview on CD138-based strategies
DOI Estrogen-related differences in antitumor immunity and the gut microbiome contribute to sexual dimorphism of colorectal cancer
DOI Anti-tumor activity of all-trans retinoic acid in gastric-cancer: gene-networks and molecular mechanisms
DOI The senescence journey in cancer immunoediting
DOI Changes in health-related quality of life in common variable immunodeficiency: an eight-year journey, including the COVID-19 pandemic
DOI Combining Translation Readthrough Inducing Drugs and Nonsense Mediated Decay Pathway Inhibition to Rescue of CFTRW1282X in Cystic Fibrosis Cell Model System
DOI BMP signaling promotes heart regeneration via alleviation of replication stress
DOI Anti-tumor activity of all-trans retinoic acid in gastric-cancer: gene-networks and molecular mechanisms
DOI Chemotherapy-induced neutropenia elicits metastasis formation in mice by promoting proliferation of disseminated tumor cells

SPOKE 6 Publications

DOI Er:Y2O3 and Nd:Y2O3 Nanoparticles: Synthesis, Pegylation, Characterization and Study of Their Luminescence Properties
DOI Metadynamics simulations for the investigation of drug loading on functionalized inorganic nanoparticles
DOI Chasing the Role of miRNAs in RCC: From Free-Circulating to Extracellular-Vesicle-Derived Biomarkers
DOI Modeling Zeta Potential for Nanoparticles in Solution: Water Flexibility Matters
DOI Red-Light-Photosensitized NO Release and Its Monitoring in Cancer Cells with Biodegradable Polymeric Nanoparticles
DOI Mixed β-γ-Cyclodextrin Branched Polymer with Multiple Photo-Chemotherapeutic Cargos
DOI Initial management approach for localized/locally advanced disease is critical to guide metastatic castration-resistant prostate cancer care
DOI Heart Rate Variability during Sleep-Related Wake Phases in REM Sleep Behavior Disorder
DOI A fluorescent probe with an ultra-rapid response to nitric oxide
DOI Vitamin C Affinity to TiO2 Nanotubes: A Computational Study by Hybrid Density Functional Theory Calculations
DOI Mechanism of RGD-conjugated nanodevice binding to its target protein integrin αVβ3 by atomistic molecular dynamics and machine learning
DOI Lung Disease Management by Iloprost-Loaded Nanoparticles to Address Hyperinflammation Associated with Cystic Fibrosis
DOI Ultrasmall Glucose-Functionalized Au-Carbon Nanohybrids: Exploiting the Warburg Effect to Image Tumors by Multimodal CT/Fluorescence Imaging
DOI The effect of polymer coating on nanoparticles’ interaction with lipid membranes studied by coarse-grained molecular dynamics simulations
DOI Nose-to-Brain Drug Delivery and Physico-Chemical Properties of Nanosystems: Analysis and Correlation Studies of Data from Scientific Literature
DOI Supramolecular red-light-photosensitized nitric oxide release with fluorescence self-reporting within biocompatible nanocarriers
DOI Organic Mixed Ionic Electronic Conductor Nanochannels for Vertical Electrochemical and Ionic Transistors
DOI Ultrafast Nanocomposite Scintillators Based on Cd-Enhanced CsPbCl3 Nanocrystals in Polymer Matrix
DOI Prognostic analysis and outcomes of metastatic pancreatic cancer patients receiving nab-paclitaxel plus gemcitabine as second or later-line treatment
DOI Androgen receptor, PARP signaling, and tumor microenvironment: the ‘perfect triad’ in prostate cancer?
DOI Spray-Coated, Magnetically Connectable Free-Standing Epidermal Electrodes for High Quality Biopotential Recordings
DOI Characterization of Sleep Structure and Autonomic Dysfunction in REM Sleep Behavior Disorder

SPOKE 7 Publications

DOI Interpretation and management of premature ventricular beats in athletes: An expert opinion document of the Italian Society of Sports Cardiology (SICSPORT)
DOI Complementary methods for the study of interactions between eosinophils and cancer cells
DOI Benzodiazepine diazepam regulates cell surface β1-adrenergic receptor density in human monocytes
DOI Behavioral Therapy for People With Diabetes Who Smoke: A Scoping Review
DOI A web-based scoping review assessing the influence of smoking and smoking cessation on antidiabetic drug meabolism: implications for medication efficacy
DOI Influence of quitting smoking on diabetes-related complications: A scoping review with a systematic search strategy
DOI Pre-scleroderma and new opportunities for preventive medicine

SPOKE 8 Publications

DOI ICGC ARGO precision medicine: genomic profiling-informed prediction of immunotherapy response in two patients with metastatic head and neck squamous cell carcinoma
DOI Programmed cell death 1 genetic variant and liver damage in nonalcoholic fatty liver disease
DOI Altered pathways of keratinization, extracellular matrix generation, angiogenesis, and stromal stem cells proliferation in patients with systemic sclerosis
DOI Role of the Gut–Liver Axis in the Pathobiology of Cholangiopathies: Basic and Clinical Evidence
DOI Autophagy, innate immunity, and cardiac disease
DOI Delta-radiomics in cancer immunotherapy response prediction: A systematic review
DOI Circulating metabolites improve the prediction of renal impairment in patients with type 2 diabetes
DOI Expression profiling of extramedullary acute myeloid leukemia suggests involvement of epithelial–mesenchymal transition pathways
DOI Autophagy, innate immunity, and cardiac disease
DOI Antineoplastic drugs inducing cardiac and vascular toxicity – An update
DOI Programmed cell death 1 genetic variant and liver damage in nonalcoholic fatty liver disease
DOI Noninvasive assessment of liver disease severity in patients with nonalcoholic fatty liver disease (NAFLD) and type 2 diabetes
DOI Oesophageal varices predict complications in compensated advanced non-alcoholic fatty liver disease
DOI Radiomics and deep learning models for CT pre-operative lymph node staging in pancreatic ductal adenocarcinoma: A systematic review and meta-analysis
DOI Accuracy of intermittently scanned continuous glucose monitoring during caesarean delivery in pregnant women with insulin-treated diabetes
DOI Validation in type 2 diabetes of a metabolomic signature of all-cause mortality
DOI Differential CpG methylation at Nnat in the early establishment of beta cell heterogeneity
DOI Machine-learning-guided recognition of α and β cells from label-free infrared micrographs of living human islets of Langerhans
DOI Navigating the landscape of liver cancer management: Study designs in clinical trials and clinical practice
DOI Serum ferritin levels can predict long-term outcomes in patients with metabolic dysfunction-associated steatotic liver disease
DOI Prevalence and Determinants of Liver Disease in Relatives of Italian Patients With Advanced MASLD
DOI Metabolic reprogramming in the CLL TME; potential for new therapeutic targets
DOI Glucose metabolism in B cell malignancies: a focus on glycolysis branching pathways
DOI Predicting early recurrence after resection of initially unresectable colorectal liver metastases: the role of baseline and pre-surgery clinical, radiological and molecular factors in a real-life multicentre experience
DOI Treatment of patients with BRAFV600E-mutated metastatic colorectal cancer after progression to encorafenib and cetuximab: data from a real-world nationwide dataset
DOI Risk of liver-related events in metabolic dysfunction–associated steatohepatitis (MASH) patients with fibrosis: A comparative analysis of various risk stratification criteria
DOI Serum ferritin levels can predict long-term outcomes in patients with metabolic dysfunction-associated steatotic liver disease
DOI The first MASH drug therapy on the horizon: Current perspectives of resmetirom
DOI Navigating the landscape of liver cancer management: Study designs in clinical trials and clinical practice
DOI Non-Invasive Diagnostic Tests for Portal Hypertension in Patients with HBV- and HCV-Related Cirrhosis: A Comprehensive Review
DOI Molecular and clinical presentation of UBA1-mutated myelodysplastic syndromes